PBOND: Web Server for the Prediction of Proline and Non-Proline cis I trans Isomerization

dc.contributor.authorExarchos, Konstantinos P.en
dc.contributor.authorExarchos, Themis P.en
dc.contributor.authorPapaloukas, Costasen
dc.contributor.authorTroganis, Anastassios N.en
dc.contributor.authorFotiadis, Dimitrios I.en
dc.date.accessioned2015-11-24T16:34:10Z
dc.date.available2015-11-24T16:34:10Z
dc.identifier.issn1672-0229-
dc.identifier.urihttps://olympias.lib.uoi.gr/jspui/handle/123456789/7767
dc.rightsDefault Licence-
dc.subjectpeptide bonden
dc.subjectcis/trans isomerizationen
dc.subjectsupport vector machineen
dc.titlePBOND: Web Server for the Prediction of Proline and Non-Proline cis I trans Isomerizationen
heal.abstractPBOND is a web server that predicts the conformation of the peptide bond between any two amino acids. PBOND classifies the peptide bonds into one out of four classes, namely cis imide (cis-Pro), cis amide (cis-nonPro), trans imide (trans-Pro) and trans amide (trans-nonPro). Moreover, for every prediction a reliability index is computed. The underlying structure of the server consists of three stages: (1) feature extraction, (2) feature selection and (3) peptide bond classification. PBOND can handle both single sequences as well as multiple sequences for batch processing. The predictions can either be directly downloaded from the web site or returned via e-mail. The PBOND web server is freely available at http://195.251.198.21/pbond.html.en
heal.accesscampus-
heal.fullTextAvailabilityTRUE-
heal.identifier.primaryhttp://dx.doi.org/10.1016/S1672-0229(08)60042-X-
heal.identifier.secondaryhttp://www.sciencedirect.com/science/article/pii/S167202290860042X-
heal.journalNameGenomics, Proteomics & Bioinformaticsen
heal.journalTypepeer reviewed-
heal.publicationDate2009-
heal.recordProviderΠανεπιστήμιο Ιωαννίνων. Σχολή Επιστημών και Τεχνολογιών. Τμήμα Βιολογικών Εφαρμογών και Τεχνολογιώνel
heal.typejournalArticle-
heal.type.elΆρθρο Περιοδικούel
heal.type.enJournal articleen

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