An empirical comparison of meta-analyses of published gene-disease associations versus consortium analyses

dc.contributor.authorJanssens, A. C.en
dc.contributor.authorGonzalez-Zuloeta Ladd, A. M.en
dc.contributor.authorLopez-Leon, S.en
dc.contributor.authorIoannidis, J. P.en
dc.contributor.authorOostra, B. A.en
dc.contributor.authorKhoury, M. J.en
dc.contributor.authorvan Duijn, C. M.en
dc.date.accessioned2015-11-24T19:36:36Z
dc.date.available2015-11-24T19:36:36Z
dc.identifier.issn1530-0366-
dc.identifier.urihttps://olympias.lib.uoi.gr/jspui/handle/123456789/23907
dc.rightsDefault Licence-
dc.subjectBreast Neoplasms/*genetics/pathologyen
dc.subjectCaspase 8/geneticsen
dc.subjectFemaleen
dc.subjectGene Frequencyen
dc.subjectGenetic Predisposition to Disease/*geneticsen
dc.subjectGenotypeen
dc.subjectHumansen
dc.subjectOdds Ratioen
dc.subject*Polymorphism, Geneticen
dc.subjectPolymorphism, Single Nucleotideen
dc.subjectRisk Factorsen
dc.titleAn empirical comparison of meta-analyses of published gene-disease associations versus consortium analysesen
heal.abstractPURPOSE: Consortia of investigators currently compile sufficiently large sample sizes to investigate the effects of low-risk susceptibility genetic variants. It is not clear how the results obtained by consortia compare with those derived from meta-analyses of published studies. METHODS: We performed meta-analyses of published data for 16 genetic polymorphisms investigated by the Breast Cancer Association Consortium, and compared sample sizes, heterogeneity, and effect sizes. PubMed, Web of Science, and Human Genome Epidemiology Network databases were searched for breast cancer case-control association studies. RESULTS: We found that meta-analyses of published data and consortium analyses were based on substantially different data. Published data by non-consortium teams amounted on average to 26.9% of all available data (range 3.0 -50.0%). Both approaches showed statistically significant decreased breast cancer risks for CASP8 D302H. The meta-analyses of published data demonstrated statistically significant results for five other genes and the consortium analyses for two other genes, but the strength of this evidence, evaluated on the basis of the Venice criteria, was not strong. CONCLUSIONS: Because both approaches identified the same gene out of 16 candidates, the methods can be complimentary. The expense and complexity of consortium-based studies should be considered vis-a-vis the potential methodological limitations of synthesis of published studies.en
heal.accesscampus-
heal.fullTextAvailabilityTRUE-
heal.identifier.primary10.1097/GIM.0b013e3181929237-
heal.identifier.secondaryhttp://www.ncbi.nlm.nih.gov/pubmed/19367188-
heal.identifier.secondaryhttp://www.nature.com/gim/journal/v11/n3/pdf/gim200923a.pdf-
heal.journalNameGenet Meden
heal.journalTypepeer-reviewed-
heal.languageen-
heal.publicationDate2009-
heal.recordProviderΠανεπιστήμιο Ιωαννίνων. Σχολή Επιστημών Υγείας. Τμήμα Ιατρικήςel
heal.typejournalArticle-
heal.type.elΆρθρο Περιοδικούel
heal.type.enJournal articleen

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